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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70718552_70720579_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70718552 - 70720579

Intron Length:
2028

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTTTTT

5'SS Class:
strong_major

3'SS Sequence:
AGCTGTGTTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTAAAAT

U12 Branch Point Sequence:
TCTGTTTTAGCT

Flanking Amino Acid:
GLSGMKTGMKAVYLSLSKSF

Intron Amino Acid Position:
85

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.8
0.73
1
82.4
30.8

Major BPS
52.8
0.07
1.3
61.7
41.5

Major PPT
65.9
0.36
1
61.9
43.9

Minor 5ss
58.1
0.27
2.3
76
39.6

Minor BPS
58.1
0.33
1.7
74.56
43.1

Associated Gene:

Gene:
IFT74

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70681624 - 70721289
39666

70681624 - 70721289
39666