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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70726250_70726758_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70726250 - 70726758

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCAGG

5'SS Class:

weak_major

3'SS Sequence:

TGTCTCTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCTTTTTGCATG

Flanking Amino Acid:

LDNGDIVVGASDGFVRVFTE

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

56.2

48.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

0.77

0.8

81.4

30.7

Minor 5ss

51.5

0.05

2.2

66.5

44.6

Minor BPS

46.5

-0.4

1.9

54.72

41.7

Associated Gene:

Gene:

PLAA

Ensembl Gene ID:

ENSAPLG00000014215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014854

70721494 - 70738845

17352

ENSAPLT00000030125

70721494 - 70738845

17352