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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70729173_70732419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70729173 - 70732419

Intron Length:

3247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TGGTGTTTAAAA

Flanking Amino Acid:

TNTQFSDPFTGAGRYVPGSA

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

73.1

0.52

0.8

69.7

29.9

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

54.2

0.13

1.9

65.01

41.5

Associated Gene:

Gene:

PLAA

Ensembl Gene ID:

ENSAPLG00000014215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030125

70721494 - 70738845

17352