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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70741410_70742395_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70741410 - 70742395

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGTGCGG

5'SS Class:

major

3'SS Sequence:

AAGAAAAATGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GCCTTCTTGATG

Flanking Amino Acid:

RVRRREGKRNSVPSGENVEE

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

53.7

43.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

49.4

-0

1.1

38.4

42.6

Minor 5ss

18.5

-3.6

3.9

29.6

43.2

Minor BPS

57.1

0.08

1.4

53.92

Associated Gene:

Gene:

CAAP1

Ensembl Gene ID:

ENSAPLG00000014602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015215

70741105 - 70756473

15369