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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70858848_70859932_F

Intron Information:

Intron Rank:
150711
Intron Class:
major
Intron Phase:
Intron Coordinates:
70858848 - 70859932
Intron Length:
1085

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTATGCACA
5'SS Class:
strong_major
3'SS Sequence:
ACTTTTGTTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AAATAAA
U12 Branch Point Sequence:
AAGATTCTACTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.2
0.76
1
73.3
37.4
Major BPS
62
0.3
1
62.3
30.4
Major PPT
83.3
0.75
0.9
80.8
36.2
Minor 5ss
45.8
-0.4
2.5
58.4
45.9
Minor BPS
41.5
-0.5
1.7
52.03
37

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030964
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000019721
70851957 - 70860255
8299