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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7102070_7111206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7102070 - 7111206

Intron Length:

9137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATTTTCTTACCA

Flanking Amino Acid:

GITPKTHLTSKSSTAFERSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.1

0.68

0.9

73.8

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

72.4

0.7

1.5

81.19

34.3

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011160

7098916 - 7229277

130362

ENSAPLT00000026296

7098916 - 7229277

130362