Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_71053690_71054718_R

Intron Information:

Intron Rank:

149812

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

71053690 - 71054718

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATT

5'SS Class:

major

3'SS Sequence:

CATACTTCACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTGTTCATACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

83.5

35.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

55.8

0.13

1.1

40.2

Minor 5ss

43.2

-0.7

2.6

60.2

44.3

Minor BPS

53.9

0.2

1.9

75.95

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041460

71052093 - 71061072

8980