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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7130420_7132137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7130420 - 7132137

Intron Length:

1718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGCA

5'SS Class:

major

3'SS Sequence:

CTGATTCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTCTTCCTAACT

Flanking Amino Acid:

DILVGGTEATGIVYNVAVVT

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.1

35.5

Major BPS

78.8

0.71

67.6

40.6

Major PPT

77.1

0.61

0.9

73.8

36.8

Minor 5ss

28.9

-2.4

3.5

38.8

46.5

Minor BPS

71.7

0.76

1.6

88.18

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362