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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7132389_7133141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7132389 - 7133141

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TGAATATAAACT

Flanking Amino Acid:

GVSSGWYCEKVVVYCPFTGI

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

76.9

33.7

Major BPS

69.8

0.49

70.3

31.8

Major PPT

79.2

0.66

0.7

73.1

31.8

Minor 5ss

30.1

-2.3

3.1

38.6

46.4

Minor BPS

-0

1.9

67.45

42.7

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362