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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7133278_7135797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7133278 - 7135797

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTACA

5'SS Class:

major

3'SS Sequence:

TATTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCTGCTTTATTT

Flanking Amino Acid:

MVSLRQRRLKKSPWSLWIWT

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

74.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.6

0.78

0.8

81.5

35.8

Minor 5ss

36.3

-1.5

43.1

Minor BPS

59.4

0.37

1.7

74.81

43.2

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362