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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7145738_7152673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7145738 - 7152673

Intron Length:

6936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGAA

5'SS Class:

major

3'SS Sequence:

TTTTGTAAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTTTTGTAAACC

Flanking Amino Acid:

ESEAVEFPCYRWLDKNEDDG

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

62.3

38.1

Major BPS

0.82

0.8

83.9

25.3

Major PPT

70.8

0.47

1.1

64.6

44.9

Minor 5ss

27.5

-2.6

3.6

37.7

Minor BPS

56.6

0.19

2.3

77.35

39.1

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362