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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7153766_7154134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7153766 - 7154134

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

FTLDTMDIGKINRILIGHDN

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

83.6

0.76

0.9

85.6

26.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362