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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7154328_7155120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7154328 - 7155120

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

ATTTTTGGACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTGATTTAATT

Flanking Amino Acid:

YPSEIVPIEKLINYEVSVVT

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

69.4

29.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

64.9

0.34

1.1

59.8

45.4

Minor 5ss

26.7

-2.7

3.3

33.7

42.1

Minor BPS

61.9

0.45

1.6

76.08

41.4

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362