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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7155282_7157987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7155282 - 7157987

Intron Length:

2706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGA

5'SS Class:

major

3'SS Sequence:

CCTTTTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

TGGGTGTTGACT

Flanking Amino Acid:

FERGATDIFKIEAADVGKIY

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

66.8

41.3

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

74.8

0.56

Minor 5ss

-1.7

3.4

47.2

48.2

Minor BPS

47.7

-0.1

2.2

66.69

44.6

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362