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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7158286_7158806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7158286 - 7158806

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATATC

5'SS Class:

major

3'SS Sequence:

ATTTCACTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

AGTCCTTTGATC

Flanking Amino Acid:

LVPDGESALEENTYEVHVLT

Intron Amino Acid Position:

927

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

78.6

35.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

81.5

0.71

0.8

74.8

34.4

Minor 5ss

39.2

-1.2

2.9

42.5

Minor BPS

62.3

0.37

1.2

65.97

33.2

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362