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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7158962_7160246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7158962 - 7160246

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

GCCTCCTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

AGCACAGTCACT

Flanking Amino Acid:

NNLNKFEKGQVDVFTIKAID

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

66.4

0.37

0.9

61.1

35.1

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

39.5

-0.7

2.4

56.96

45.1

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362