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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7160381_7161294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7160381 - 7161294

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

GTCATTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCCTGTGTAAGT

Flanking Amino Acid:

VEIVDLKESTTYYFPCQRWL

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.3

63.1

43.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

75.2

0.57

0.9

69.6

36.6

Minor 5ss

35.7

-1.6

2.9

42.3

38.1

Minor BPS

42.8

-0.4

2.5

62.23

48.4

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362