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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7163621_7164244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7163621 - 7164244

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCAACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

ATCTCTCCAACC

Flanking Amino Acid:

KKIKIGHDNKGNSTGWFLEW

Intron Amino Acid Position:

1151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

23.8

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

69.5

0.44

0.9

62.3

32.1

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

51.1

0.01

1.9

65.7

39.9

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362