Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_71643120_71644560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71643120 - 71644560

Intron Length:

1441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGCCTC

5'SS Class:

major

3'SS Sequence:

ATGTTGAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTTTCTGACTT

Flanking Amino Acid:

PATPDGVAYLKNDPEKLDAF

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

40.1

Major BPS

0.85

0.9

39.9

Major PPT

66.5

0.37

1.1

59.2

44.8

Minor 5ss

38.7

-1.3

3.2

51.2

39.7

Minor BPS

57.7

0.32

1.7

77.06

39.7

Associated Gene:

Gene:

GRIN3A

Ensembl Gene ID:

ENSAPLG00000008012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008306

71588433 - 71660394

71962