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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7168058_7170975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7168058 - 7170975

Intron Length:

2918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTATTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

RNSVNQFIVELEDVGDIIEK

Intron Amino Acid Position:

1267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

84.1

0.77

0.8

85.9

26.9

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362