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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_71682748_71682937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71682748 - 71682937

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTATATGAAAC

Flanking Amino Acid:

NRHLADVLERVNSKGYKVYG

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.3

40.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

84.7

0.78

0.8

79.6

32.4

Minor 5ss

41.6

-0.9

2.9

45.2

Minor BPS

46.7

-0.2

1.8

59.62

38.3

Associated Gene:

Gene:

RNF20

Ensembl Gene ID:

ENSAPLG00000007347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007731

71665286 - 71687824

22539