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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7171093_7175548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7171093 - 7175548

Intron Length:

4456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGT

5'SS Class:

major

3'SS Sequence:

CTGTCTACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGTTTTGAAAA

Flanking Amino Acid:

AIRRLLPNGKGSETVTFPCE

Intron Amino Acid Position:

1306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.7

43.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

77.4

0.62

0.9

74.3

35.1

Minor 5ss

44.2

-0.6

3.2

64.5

46.9

Minor BPS

58.4

0.26

1.5

68.85

37.5

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011160

7098916 - 7229277

130362

ENSAPLT00000026296

7098916 - 7229277

130362