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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_71757897_71772570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71757897 - 71772570

Intron Length:

14674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

CTTTTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCATTATTAACC

Flanking Amino Acid:

CVLASTPTAIIFIGEISMYF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

79.9

0.67

0.9

76.4

32.3

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

65.7

0.47

1.6

72.02

38.9

Associated Gene:

Gene:

PLPPR1

Ensembl Gene ID:

ENSAPLG00000006758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043914

71738325 - 71781603

43279

ENSAPLT00000007026

71738325 - 71807063

68739