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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_71772760_71806954_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71772760 - 71806954

Intron Length:

34195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTATTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CATGCTGTATTT

Flanking Amino Acid:

SIIPCFIFVELVIMAGTVLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

77.5

0.62

0.9

73.4

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

43.3

-0.4

2.2

59.84

44.7

Associated Gene:

Gene:

PLPPR1

Ensembl Gene ID:

ENSAPLG00000006758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007026

71738325 - 71807063

68739