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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7185485_7189832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7185485 - 7189832

Intron Length:

4348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTTGT

5'SS Class:

major

3'SS Sequence:

TGTGACTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTCCCTTTAACC

Flanking Amino Acid:

LDVGEIKKVEVGHDGATPES

Intron Amino Acid Position:

1548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

71.8

40.6

Major BPS

77.3

0.68

79.3

29.4

Major PPT

73.9

0.54

66.3

40.4

Minor 5ss

40.9

-1

3.1

59.4

Minor BPS

77.1

0.83

1.2

79.7

35.5

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362