About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_71914624_71922010_F

Intron Information:

Intron Rank:
130460
Intron Class:
major
Intron Phase:
Intron Coordinates:
71914624 - 71922010
Intron Length:
7387

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTAAGTATT
5'SS Class:
strong_major
3'SS Sequence:
ACATTATTTTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTAAAT
U12 Branch Point Sequence:
TGGACATTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.1
0.99
0.8
92.6
23.1
Major BPS
82.3
0.8
0.9
87.6
25.7
Major PPT
73.5
0.53
0.9
70.7
39.3
Minor 5ss
41.8
-0.9
2.9
57.3
41.2
Minor BPS
48.7
-0
1.9
66.81
43.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000020173
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000029248
71914533 - 71946511
31979