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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7192580_7196967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7192580 - 7196967

Intron Length:

4388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

TCACTCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

CGGTCTTTCACT

Flanking Amino Acid:

EEIQLEKNGDRFERGQEDSF

Intron Amino Acid Position:

1590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

77.7

0.69

30.2

Major PPT

75.5

0.57

0.8

66.2

35.6

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

0.36

1.8

71.92

45.4

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362