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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72076535_72079412_F

Intron Information:

Intron Rank:

147378

Intron Class:

major

Intron Phase:

Intron Coordinates:

72076535 - 72079412

Intron Length:

2878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGGCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

CTCTGCTAAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

71.4

0.48

61.6

44.5

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

43.7

-0.6

2.3

50.03

49.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041984

72076101 - 72080134

4034