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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7211616_7223287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7211616 - 7223287

Intron Length:

11672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGGGCA

5'SS Class:

major

3'SS Sequence:

TTTTACTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

AATTTCCTAACT

Flanking Amino Acid:

CKVRIWHDNKGIAPGWHLEY

Intron Amino Acid Position:

1751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

66.7

39.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

65.8

0.36

1.1

67.2

Minor 5ss

24.9

-2.9

3.2

30.6

42.7

Minor BPS

0.68

1.6

84.38

35.5

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362