Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72183844_72183981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72183844 - 72183981

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAACGG

5'SS Class:

major

3'SS Sequence:

TTATTTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TCTCTCTGAAAT

Flanking Amino Acid:

VRGWHPPREQEKRKRQTEIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.8

43.2

Major BPS

68.1

0.45

58.1

38.5

Major PPT

75.3

0.57

75.3

38.5

Minor 5ss

25.3

-2.8

2.9

30.2

42.8

Minor BPS

59.2

0.37

1.6

75.47

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039415

72183619 - 72378390

194772