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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7223459_7224565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7223459 - 7224565

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTATGCCTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TGCTGCTTAACA

Flanking Amino Acid:

NDILELKERTAYEIVTVTSD

Intron Amino Acid Position:

1808

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

68.7

0.42

1.1

67.8

37.9

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

68.8

0.59

1.8

75.93

41.5

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011160

7098916 - 7229277

130362

ENSAPLT00000026296

7098916 - 7229277

130362