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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7224705_7226180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7224705 - 7226180

Intron Length:

1476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGGGA

5'SS Class:

major

3'SS Sequence:

CTGTTTCCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

TGTTTCCTATAG

Flanking Amino Acid:

ENSSKKRRFERGATDTFQFS

Intron Amino Acid Position:

1854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

56.8

42.4

Major BPS

70.6

0.51

73.3

31.3

Major PPT

78.3

0.64

0.8

73.2

31.9

Minor 5ss

27.3

-2.6

3.6

38.1

46.8

Minor BPS

46.7

-0.3

57.97

43.2

Associated Gene:

Gene:

LOXHD1

Ensembl Gene ID:

ENSAPLG00000010718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026296

7098916 - 7229277

130362

ENSAPLT00000011160

7098916 - 7229277

130362