Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7237603_7238661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7237603 - 7238661

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

AGGTCCCTAACG

Flanking Amino Acid:

LSMLEDGEDVRRLPCMHLFH

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

65.2

39.1

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

81.2

0.7

75.9

26.2

Minor 5ss

39.3

-1.2

51.9

44.8

Minor BPS

60.3

0.18

1.8

63.71

43.6

Associated Gene:

Gene:

RNF165

Ensembl Gene ID:

ENSAPLG00000006619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006863

7237451 - 7247734

10284