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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7240278_7241318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7240278 - 7241318

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCACTTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TTCTCCCTCACT

Flanking Amino Acid:

FPRSTSSTQMVVHEIRNYPY

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

79.1

0.66

0.8

73.4

31.3

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

61.9

0.46

2.1

84.61

Associated Gene:

Gene:

RNF165

Ensembl Gene ID:

ENSAPLG00000006619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006863

7237451 - 7247734

10284