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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72425428_72431343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72425428 - 72431343

Intron Length:

5916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGA

5'SS Class:

major

3'SS Sequence:

CTTTTGTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTTTTGTCCACA

Flanking Amino Acid:

EYILYSESMKNVLKKRDQVQ

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.4

39.3

Major BPS

72.7

0.56

30.1

Major PPT

81.3

0.7

0.8

75.9

32.8

Minor 5ss

27.9

-2.5

3.5

46.8

Minor BPS

43.8

-0.4

2.5

62.43

44.3

Associated Gene:

Gene:

SNX30

Ensembl Gene ID:

ENSAPLG00000006070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006331

72419345 - 72465776

46432

ENSAPLT00000025404

72419345 - 72465776

46432