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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72574183_72576618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72574183 - 72576618

Intron Length:

2436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCGT

5'SS Class:

major

3'SS Sequence:

TGTTTATCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCTTCTTTACCC

Flanking Amino Acid:

MLPNTGKLAGCTLFI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.6

0.69

0.8

78.8

34.8

Minor 5ss

-2.1

3.4

39.3

Minor BPS

70.5

0.62

1.6

77.59

Associated Gene:

Gene:

HSDL2

Ensembl Gene ID:

ENSAPLG00000005558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005764

72574166 - 72586510

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