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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72577288_72577414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72577288 - 72577414

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTGG

5'SS Class:

major

3'SS Sequence:

ATTTTAAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTATTTTAAAA

Flanking Amino Acid:

AVEKAVKTFGGIDILVNNAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.3

44.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.5

0.35

1.1

58.3

45.1

Minor 5ss

49.3

-0

2.5

64.5

46.9

Minor BPS

61.2

0.35

1.4

68.54

37.9

Associated Gene:

Gene:

HSDL2

Ensembl Gene ID:

ENSAPLG00000005558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005764

72574166 - 72586510

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