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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72579813_72583350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72579813 - 72583350

Intron Length:

3538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCAAACTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

ATTTTCTTACCC

Flanking Amino Acid:

VAVNALWPKTAIHTAAMDML

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

68.4

0.41

57.6

42.6

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

71.8

0.66

1.5

80.19

34.7

Associated Gene:

Gene:

HSDL2

Ensembl Gene ID:

ENSAPLG00000005558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005764

72574166 - 72586510

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