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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72583546_72583985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72583546 - 72583985

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

AACTCCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TATTTTTTAACT

Flanking Amino Acid:

KDFDVYAIAPGHPLMPDFFL

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

65.9

0.36

0.8

55.9

35.3

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

83.8

1.14

0.9

92.59

29.1

Associated Gene:

Gene:

HSDL2

Ensembl Gene ID:

ENSAPLG00000005558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005764

72574166 - 72586510

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