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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72584058_72585406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72584058 - 72585406

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGAAA

5'SS Class:

major

3'SS Sequence:

CTATTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CTTTCAGCAAAA

Flanking Amino Acid:

DMTATKPESHGASQTFKEEK

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.6

39.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

82.6

0.73

0.7

81.4

30.3

Minor 5ss

30.3

-2.3

3.3

35.3

43.5

Minor BPS

43.6

-0.4

2.4

62.17

43.6

Associated Gene:

Gene:

HSDL2

Ensembl Gene ID:

ENSAPLG00000005558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005764

72574166 - 72586510

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