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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72691724_72693440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72691724 - 72693440

Intron Length:

1717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTAAAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTGTTTTAACT

Flanking Amino Acid:

VLAPCAGRRRVVNRSVPDVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

41.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.41

64.2

40.5

Minor 5ss

32.6

-2

3.1

33.4

41.6

Minor BPS

78.3

0.97

1.2

90.89

33.1

Associated Gene:

Gene:

SUSD1

Ensembl Gene ID:

ENSAPLG00000004979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005156

72691627 - 72736805

45179