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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72696852_72699037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72696852 - 72699037

Intron Length:

2186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTCCTCTTACGT

Flanking Amino Acid:

AWEPATLRCKGVDCGDPPSI

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

73.9

0.54

0.8

68.9

31.7

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

51.7

0.13

1.9

72.32

44.9

Associated Gene:

Gene:

SUSD1

Ensembl Gene ID:

ENSAPLG00000004979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005156

72691627 - 72736805

45179