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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72817673_72819456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72817673 - 72819456

Intron Length:

1784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AGATCTTTAAAA

Flanking Amino Acid:

RQGFAATLEQVYFGTSHPRS

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

88.5

0.87

0.7

83.9

31.1

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

66.5

0.51

1.3

69.07

36.4

Associated Gene:

Gene:

UGCG

Ensembl Gene ID:

ENSAPLG00000011958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012447

72812551 - 72837075

24525