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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7288401_7292324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7288401 - 7292324

Intron Length:

3924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTTGA

5'SS Class:

major

3'SS Sequence:

TTCCCTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTTGTTTGCATT

Flanking Amino Acid:

GLIEELSADTGHLDPGVLAS

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

67.6

40.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

80.9

0.69

0.7

76.3

25.9

Minor 5ss

41.1

-1

2.6

50.4

45.9

Minor BPS

47.4

-0.1

1.9

71.39

40.7

Associated Gene:

Gene:

C18orf25

Ensembl Gene ID:

ENSAPLG00000017723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043029

7284251 - 7310020

25770

ENSAPLT00000040257

7283345 - 7309927

26583