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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7288401_7309203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7288401 - 7309203

Intron Length:

20803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGAT

5'SS Class:

major

3'SS Sequence:

TTCCCTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTTGTTTGCATT

Flanking Amino Acid:

SSKTITAEIPGHLDPGVLAS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

66.3

39.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

80.9

0.69

0.7

76.3

25.9

Minor 5ss

28.8

-2.4

3.9

45.4

49.7

Minor BPS

47.4

-0.1

1.9

71.39

40.7

Associated Gene:

Gene:

C18orf25

Ensembl Gene ID:

ENSAPLG00000017723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037006

7283345 - 7309927

26583