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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7292508_7309203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7292508 - 7309203

Intron Length:

16696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGAT

5'SS Class:

major

3'SS Sequence:

TCTCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GATTTCTGACAG

Flanking Amino Acid:

SSKTITAEIPDGPPVVAHYD

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

66.3

39.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

28.8

-2.4

3.9

45.4

49.7

Minor BPS

-0.4

1.8

51.4

42.4

Associated Gene:

Gene:

C18orf25

Ensembl Gene ID:

ENSAPLG00000017723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040257

7283345 - 7309927

26583

ENSAPLT00000043029

7284251 - 7310020

25770