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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72927387_72928505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72927387 - 72928505

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAGGTATC

5'SS Class:

major

3'SS Sequence:

TCTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

CAAATCTTATTT

Flanking Amino Acid:

FTQFKSYQLERWLEEKNSMT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

76.2

39.9

Major BPS

82.6

0.81

0.8

71.7

Major PPT

85.8

0.81

0.7

84.8

29.6

Minor 5ss

40.3

-1.1

3.1

37.5

Minor BPS

49.6

0.05

1.6

62.16

42.1

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681