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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72931549_72934258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72931549 - 72934258

Intron Length:

2710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TTGTGTTATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

ACTTTGTTACTA

Flanking Amino Acid:

SSITAEIQASESQYQAYCLL

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

71.4

0.53

1.2

63.4

Major PPT

77.6

0.62

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

-0.2

2.2

60.27

40.8

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681