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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72935910_72937598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72935910 - 72937598

Intron Length:

1689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTTTT

5'SS Class:

major

3'SS Sequence:

TTTCTTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GTCTCTGCAATT

Flanking Amino Acid:

LLTCGLDTALGYLSKAKDIY

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

81.7

32.3

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

77.3

0.61

0.9

77.1

37.1

Minor 5ss

48.6

-0.1

2.4

67.6

43.4

Minor BPS

47.8

-0

2.2

68.3

43.3

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681