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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72937787_72946361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72937787 - 72946361

Intron Length:

8575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

AGTACCAGAACT

Flanking Amino Acid:

QSYGEECSAKILIITRMDSE

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

81.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

82.2

0.72

0.8

73.3

37.1

Minor 5ss

31.5

-2.1

2.8

40.7

45.1

Minor BPS

54.3

0.21

1.8

74.82

40.8

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681